LargePlans is actively generating new and improved software tools that implement the methodologies used and/or developed within the project. All these tools are provided under a free and open-source license and come with user-friendly guides and manuals to facilitate their use by the community, from beginners to experts. Most of these tools are already being used by other researchers worldwide, as is demonstrated e.g. by various (non-self) citations here and here.
R PACKAGES:
Barbosa A.M. (2015). fuzzySim: Fuzzy Similarity in Species Distributions. R package version 2.0 available on CRAN. Package homepage: http://fuzzysim.r-forge.r-project.org/
Barbosa A.M., Brown J.A., Jiménez-Valverde A. & Real R. (2016). modEvA: Model Evaluation and Analysis. R package version 1.3.2 available on CRAN. Package homepage: http://modeva.r-forge.r-project.org/
Barbosa A.M., Marques J.T., Santos S.M., Lourenço A., Medinas D., Beja P. & Mira A. (2016). DeadCanMove: Assess how spatial roadkill patterns change with temporal sampling scheme. R package version 0.4/r25. Available at http://deadcanmove.r-forge.r-project.org/
Mestre F., Ascensão F. & Barbosa A.M. (2018) gDefrag: Graph-Based Landscape De-Fragmentation. R package version 0.1 available on CRAN. Package homepage: https://github.com/FMestre1/gDefrag
Olivero J., Hidalgo R., Márquez A.L., Barbosa A.M. & Real R. (2015) RMacoqui: Identifying and describing chorotypes based on similarity between species distributions. Available at http://rmacoqui.r-forge.r-project.org/
USER MANUALS:
Barbosa A.M. (2015) A beginners tutorial on the fuzzySim R package. Available at http://fuzzysim.r-forge.r-project.org/fuzzySim-tutorial.html
Barbosa A.M. (2015) A quick guide to species distribution modelling with fuzzySim. Available at http://fuzzysim.r-forge.r-project.org/fuzzySim-modelling-tutorial.html
Barbosa A.M. (2015) Model evaluation and analysis: the modEvA R package in a nutshell. Available at http://modeva.r-forge.r-project.org/modEvA-tutorial.html
Barbosa A.M. (2016) A brief tutorial on quantifying pairwise similarity between rangemaps. Available at http://fuzzysim.r-forge.r-project.org/pairwise_rangemaps_tutorial.html
Barbosa A.M. & Guerrero J.C. (2016) Construcción y evaluación de modelos de distribución con los paquetes R ‘fuzzySim’ y ‘modEvA’. Available at http://modeva.r-forge.r-project.org/Guia_modelacion_fuzzySim_modEvA.html
Mestre F., Ascensão F. & Barbosa A.M. (2018) A quick guide to the gDefrag package. Available at https://geekcologist.wordpress.com/2018/05/24/a-quick-guide-to-the-gdefrag-package/
Olivero J., Hidalgo R., Márquez A.L., Barbosa A.M. & Real R. (2016) A quick tutorial of RMacoqui. Available at http://rmacoqui.r-forge.r-project.org/RMacoqui-tutorial.html